Module Molecule

Make a Molecule() from a database, based on model_id and molec_id.

Returns None if the molecule is not available in the database.

Parameters:

• molec_id (string) - the model_id of the molecule
• molecule (string) - the short hand name of the molecule
• path_gastronoom (string) - the output path in the ~/GASTRoNOoM/. directory

  (default: codeSep2010)

• mline_db (Database()) - The mline database, which can be passed in case one wants to reduce overhead. Not required though.

  (default: None)

Returns: Molecule()

the molecule with all its information embedded